| Discovery and Enzymatic Screening of Genome-Mined Microbial Levanases to Produce Second-Generation beta-(2,6)-Fructooligosaccharides: Catalytic Properties | Chen L, Hill A, Petit JL, Mariage A, de Berardinis V and Karboune S | |  | | In vitro Applications of the Terpene Mini-Path 2.0 | Couillaud J, Amouric A, Courvoisier-Dezord E, Leydet L, Schweitzer N, Rosso MN, Hage H, Loussouarn-Yvon M, Vincentelli R, Petit JL, de Berardinis V, Attolini M, Maresca M, Duquesne K and Iacazio G | | | | In vitro Applications of the Terpene Mini-Path 2.0 | Couillaud J, Amouric A, Courvoisier-Dezord E, Leydet L, Schweitzer N, Rosso MN, Hage H, Loussouarn-Yvon M, Vincentelli R, Petit JL, de Berardinis V, Attolini M, Maresca M, Duquesne K and Iacazio G | | | | Synthesis of Chiral Amines via a Bi-Enzymatic Cascade Using an Ene-Reductase and Amine Dehydrogenase | Jongkind EPJ, Fossey-Jouenne A, Mayol O, Zaparucha A, Vergne-Vaxelaire C and Paul CE | | | | Change in Cofactor Specificity of Oxidoreductases by Adaptive Evolution of an Escherichia coli NADPH-Auxotrophic Strain | Bouzon M, Doring V, Dubois I, Berger A, Stoffel GMM, Ramirez LC, Meyer SN, Foure M, Roche D, Perret A, Erb TJ, Bar-Even A and Lindner SN | | | | Biocatalysed synthesis of chiral amines: continuous colorimetric assays for mining amine-transaminases | Gourbeyre L, Heuson E, Charmantray F, Helaine V, Debard A, Petit JL, de Berardinis V and Gefflaut T | | | | Complete Genome Sequences of Two Pseudomonas Species Isolated from Marine Environments of the Pacific Ocean | Wang SZ, Cruaud C, Aury JM, Vallenet D, Poulain J, Vacherie B, Zaparucha A and Vergne-Vaxelaire C | | | | Metagenomic Mining for Amine Dehydrogenase Discovery | Caparco AA, Pelletier E, Petit JL, Jouenne A, Bommarius BR, de Berardinis V, Zaparucha A, Champion JA, Bommarius AS and Vergne-Vaxelaire C | | | | Pyruvate Aldolases Catalyze Cross-Aldol Reactions between Ketones: Highly Selective Access to Multi-Functionalized Tertiary Alcohols | Laurent V, Gourbeyre L, Uzel A, Helaine V, Nauton L, Traikia M, de Berardinis V, Salanoubat M, Gefflaut T, Lemaire M and Guerard-Helaine C | | | | ATP Regeneration System in Chemoenzymatic Amide Bond Formation with Thermophilic CoA Ligase | Lelievre CM, Balandras M, Petit JL, Vergne-Vaxelaire C and Zaparucha A | | | | Continuous Culture Adaptation of Methylobacterium extorquens AM1 and TK 0001 to Very High Methanol Concentrations | Belkhelfa S, Roche D, Dubois I, Berger A, Delmas VA, Cattolico L, Perret A, Labadie K, Perdereau AC, Darii E, Pateau E, de Berardinis V, Salanoubat M, Bouzon M and Doring V | | | | 2-Deoxyribose-5-phosphate aldolase, a remarkably tolerant aldolase towards nucleophile substrates | Chambre D, Guerard-Helaine C, Darii E, Mariage A, Petit JL, Salanoubat M, de Berardinis V, Lemaire M and Helaine V | | | | Simplified in Vitro and in Vivo Bioaccess to Prenylated Compounds | Couillaud J, Rico J, Rubini A, Hamrouni T, Courvoisier-Dezord E, Petit JL, Mariage A, Darii E, Duquesne K, de Berardinis V and Iacazio G | | | | XszenFHal, a novel tryptophan 5-halogenase from Xenorhabdus szentirmaii | Domergue J, Erdmann D, Fossey-Jouenne A, Petit JL, Debard A, de Berardinis V, Vergne-Vaxelaire C and Zaparucha A | | | | Enantioselective Synthesis of D- and L-alpha-Amino Acids by Enzymatic Transamination Using Glutamine as Smart Amine Donor | Heuson E, Charmantray F, Petit JL, de Berardinis V and Gefflaut T | | | | Discovery of new levansucrase enzymes with interesting properties and improved catalytic activity to produce levan and fructooligosaccharides | Hill A, Chen L, Mariage A, Petit JL, de Berardinis V and Karboune S | | | | Achiral Hydroxypyruvaldehyde Phosphate as a Platform for Multi-Aldolases Cascade Synthesis of Diuloses and for a Quadruple Acetaldehyde Addition Catalyzed by 2-Deoxyribose-5-Phosphate Aldolases | Laurent V, Helaine V, Vergne-Vaxelaire C, Nauton L, Traikia M, Petit JL, Salanoubat M, de Berardinis V, Lemaire M and Guerard-Helaine C | | | | Exploration of Aldol Reactions Catalyzed by Stereoselective Pyruvate Aldolases with 2-Oxobutyric Acid as Nucleophile | Laurent V, Uzel A, Helaine V, Nauton L, Traikia M, Gefflaut T, Salanoubat M, de Berardinis V, Lemaire M and Guerard-Helaine C | | | | A family of native amine dehydrogenases for the asymmetric reductive amination of ketones | Mayol O, Bastard K, Beloti L, Frese A, Turkenburg JP, Petit JL, Mariage A, Debard A, Pellouin V, Perret A, de Berardinis V, Zaparucha A, Grogan G and Vergne-Vaxelaire C | | | | Tuning of the enzyme ratio in a neutral redox convergent cascade: A key approach for an efficient one-pot/two-step biocatalytic whole-cell system | Menil S, Petit JL, Courvoisier-Dezord E, Debard A, Pellouin V, Reignier T, Sergent M, Deyris V, Duquesne K, de Berardinis V and Alphand V | | | | Exploring natural biodiversity to expand access to microbial terpene synthesis | Rico J, Duquesne K, Petit JL, Mariage A, Darii E, Peruch F, de Berardinis V and Iacazio G | | | | Synthesis of Branched-Chain Sugars with a DHAP-Dependent Aldolase: Ketones are Electrophile Substrates of Rhamnulose-1-phosphate Aldolases | Laurent V, Darii E, Aujon A, Debacker M, Petit JL, Helaine V, Liptaj T, Breza M, Mariage A, Nauton L, Traikia M, Salanoubat M, Lemaire M, Guerard-Helaine C and de Berardinis V | | | | Elucidation of the trigonelline degradation pathway reveals previously undescribed enzymes and metabolites | Perchat N, Saaidi PL, Darii E, Pelle C, Petit JL, Besnard-Gonnet M, de Berardinis V, Dupont M, Gimbernat A, Salanoubat M, Fischer C and Perret A | | | | Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans | Seeleuthner Y, Mondy S, Lombard V, Carradec Q, Pelletier E, Wessner M, Leconte J, Mangot JF, Poulain J, Labadie K, Logares R, Sunagawa S, de Berardinis V, Salanoubat M, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Pesant S, Poulton N, Stepanauskas R, Bork P, Bowler C, Hingamp P, Sullivan MB, Iudicone D, Massana R, Aury JM, Henrissat B, Karsenti E, Jaillon O, Sieracki M, de Vargas C, Wincker P and Tara Oceans C | | | | Characterization of a thermotolerant ROK-type mannofructokinase from Streptococcus mitis: application to the synthesis of phosphorylated sugars | Vergne-Vaxelaire C, Mariage A, Petit JL, Fossey-Jouenne A, Guerard-Helaine C, Darii E, Debard A, Nepert S, Pellouin V, Lemaire M, Zaparucha A, Salanoubat M and de Berardinis V | | | | Parallel evolution of non-homologous isofunctional enzymes in methionine biosynthesis | Bastard K, Perret A, Mariage A, Bessonnet T, Pinet-Turpault A, Petit JL, Darii E, Bazire P, Vergne-Vaxelaire C, Brewee C, Debard A, Pellouin V, Besnard-Gonnet M, Artiguenave F, Medigue C, Vallenet D, Danchin A, Zaparucha A, Weissenbach J, Salanoubat M and De Berardinis V | | | | Biocatalytic Approaches towards the Synthesis of Chiral Amino Alcohols from Lysine: Cascade Reactions Combining alpha-Keto Acid Oxygenase Hydroxylation with Pyridoxal Phosphate- Dependent Decarboxylation | Baud D, Peruch O, Saaidi PL, Fossey A, Mariage A, Petit JL, Salanoubat M, Vergne-Vaxelaire C, de Berardinis V and Zaparucha A | | | | Expanding the reaction space of aldolases using hydroxypyruvate as a nucleophilic substrate | de Berardinis V, Guerard-Helaine C, Darii E, Bastard K, Helaine V, Mariage A, Petit JL, Poupard N, Sanchez-Moreno I, Stam M, Gefflaut T, Salanoubat M and Lemaire M | | | | Stereoselective synthesis of gamma-hydroxy-alpha-amino acids through aldolase-transaminase recycling cascades | Guerard-Helaine C, Heuson E, Ndiaye M, Gourbeyre L, Lemaire M, Helaine V, Charmantray F, Petit JL, Salanoubat M, de Berardinis V and Gefflaut T | | | | One-pot, two-step cascade synthesis of naturally rare L-erythro (3S,4S) ketoses by coupling a thermostable transaminase and transketolase | Lorilliere M, De Sousa M, Bruna F, Heuson E, Gefflaut T, de Berardinis V, Saravanan T, Yi D, Fessner WD, Charmantray F and Hecquet L | | | | Continuous colorimetric screening assays for the detection of specific l- or d-alpha-amino acid transaminases in enzyme libraries | Heuson E, Petit JL, Debard A, Job A, Charmantray F, de Berardinis V and Gefflaut T | | | | Asymmetric reductive amination by a wild-type amine dehydrogenase from the thermophilic bacteria Petrotoga mobilis | Mayol O, David S, Darii E, Debard A, Mariage A, Pellouin V, Petit JL, Salanoubat M, de Berardinis V, Zaparucha A and Vergne-Vaxelaire C | | | | Osmotic stress response in Acinetobacter baylyi: identification of a glycine-betaine biosynthesis pathway and regulation of osmoadaptive choline uptake and glycine-betaine synthesis through a choline-responsive BetI repressor | Scholz A, Stahl J, de Berardinis V, Muller V and Averhoff B | | | | Genetic Dissection of the Type VI Secretion System in Acinetobacter and Identification of a Novel Peptidoglycan Hydrolase, TagX, Required for Its Biogenesis | Weber BS, Hennon SW, Wright MS, Scott NE, de Berardinis V, Foster LJ, Ayala JA, Adams MD and Feldman MF | | | | Genome Mining for Innovative Biocatalysts: New Dihydroxyacetone Aldolases for the Chemist's Toolbox | Guerard-Helaine C, de Berardinis V, Besnard-Gonnet M, Darii E, Debacker M, Debard A, Fernandes C, Helaine V, Mariage A, Pellouin V, Perret A, Petit JL, Sancelme M, Lemaire M and Salanoubat M | | | | Straightforward Synthesis of Terminally Phosphorylated L-Sugars via Multienzymatic Cascade Reactions | Helaine V, Mahdi R, Babu GVS, de Berardinis V, Wohlgemuth R, Lemaire M and Guerard-Helaine C | | | | Design of Artificial Metabolisms in Layered Nanomaterials for the Enzymatic Synthesis of Phosphorylated Sugars | Mahdi R, Guerard-Helaine C, Prevot V, de Berardinis V, Forano C and Lemaire M | | | | Revealing the hidden functional diversity of an enzyme family | Bastard K, Smith AAT, Vergne-Vaxelaire C, Perret A, Zaparucha A, De Melo-Minardi R, Mariage A, Boutard M, Debard A, Lechaplais C, Pelle C, Pellouin V, Perchat N, Petit JL, Kreimeyer A, Medigue C, Weissenbach J, Artiguenave F, De Berardinis V, Vallenet D and Salanoubat M | | | | Synthesis of Mono- and Dihydroxylated Amino Acids with New alpha-Ketoglutarate-Dependent Dioxygenases: Biocatalytic Oxidation of C-H Bonds | Baud D, Saaidi PL, Monfleur A, Harari M, Cuccaro J, Fossey A, Besnard M, Debard A, Mariage A, Pellouin V, Petit JL, Salanoubat M, Weissenbach J, de Berardinis V and Zaparucha A | | | | Large alpha-aminonitrilase activity screening of nitrilase superfamily members: Access to conversion and enantiospecificity by LC-MS | Bordier F, Stam M, Darii E, Tricot S, Fossey A, Rohault J, Debard A, Mariage A, Pellouin V, Petit JL, Perret A, Vallenet D, Salanoubat M, Weissenbach J, Vergne-Vaxelaire C, de Berardinis V and Zaparucha A | | | | Broadening the scope of Baeyer-Villiger monooxygenase activities toward alpha,beta-unsaturated ketones: a promising route to chiral enol-lactones and ene-lactones | Reignier T, de Berardinis V, Petit JL, Mariage A, Hamze K, Duquesne K and Alphand V | | | | Novel metabolic features in Acinetobacter baylyi ADP1 revealed by a multiomics approach | Stuani L, Lechaplais C, Salminen AV, Segurens B, Durot M, Castelli V, Pinet A, Labadie K, Cruveiller S, Weissenbach J, de Berardinis V, Salanoubat M and Perret A | | | | Thermostable Transketolase from Geobacillus stearothermophilus: Characterization and Catalytic Properties | Abdoul-Zabar J, Sorel I, Helaine V, Charmantray F, Devamani T, Yi D, de Berardinis V, Louis D, Marliere P, Fessner WD and Hecquet L | | | | Structure and Biosynthesis of Fimsbactins A-F, Siderophores from Acinetobacter baumannii and Acinetobacter baylyi | Proschak A, Lubuta P, Grun P, Lohr F, Wilharm G, De Berardinis V and Bode HB | | | | Evolution study of the Baeyer-Villiger monooxygenases enzyme family: Functional importance of the highly conserved residues | Rebehmed J, Alphand V, de Berardinis V and de Brevern AG | | | | Nitrilase Activity Screening on Structurally Diverse Substrates: Providing Biocatalytic Tools for Organic Synthesis | Vergne-Vaxelaire C, Bordier F, Fossey A, Besnard-Gonnet M, Debard A, Mariage A, Pellouin V, Perret A, Petit JL, Stam M, Salanoubat M, Weissenbach J, De Berardinis V and Zaparucha A | | | | Microbial urate catabolism: characterization of HpyO, a non-homologous isofunctional isoform of the flavoprotein urate hydroxylase HpxO | Michiel M, Perchat N, Perret A, Tricot S, Papeil A, Besnard M, de Berardinis V, Salanoubat M and Fischer C | | | | FSAB: A new fructose-6-phosphate aldolase from Escherichia coli. Cloning, over-expression and comparative kinetic characterization with FSAA | Sanchez-Moreno I, Nauton L, Thery V, Pinet A, Petit JL, de Berardinis V, Samland AK, Guerard-Helaine C and Lemaire M | | | | Complete Genome Sequence of Streptomyces cattleya NRRL 8057, a Producer of Antibiotics and Fluorometabolites | Barbe V, Bouzon M, Mangenot S, Badet B, Poulain J, Segurens B, Vallenet D, Marliere P and Weissenbach J | Journal of Bacteriology 193 (18), 5055-5056, 2011 | | | Salt adaptation in Acinetobacter baylyi: identification and characterization of a secondary glycine betaine transporter | Sand M, de Berardinis V, Mingote A, Santos H, Gottig S, Muller V and Averhoff B | Archives of Microbiology 193 (10), 723-730, 2011 | | | Biocatalysis, bioconversion and white technology: tools from the living world for chemistry | Zaparucha A, de Berardinis V and Weissenbach J | Actualite Chimique (353-54), 43-50, 2011 | | | A saturated SSR/DArT linkage map of Musa acuminata addressing genome rearrangements among bananas | Hippolyte I, Bakry F, Seguin M, Gardes L, Rivallan R, Risterucci AM, Jenny C, Perrier X, Carreel F, Argout X, Piffanelli P, Khan IA, Miller RNG, Pappas GJ, Mbeguie-A-Mbeguie D, Matsumoto T, De Bernardinis V, Huttner E, Kilian A, Baurens FC, D'Hont A, Cote F, Courtois B and Glaszmann JC | Bmc Plant Biology 10 (), 65, 2010 | | | Digital expression profiling of novel diatom transcripts provides insight into their biological functions | Maheswari U, Jabbari K, Petit JL, Porcel BM, Allen AE, Cadoret JP, De Martino A, Heijde M, Kaas R, La Roche J, Lopez PJ, Martin-Jezequel V, Meichenin A, Mock T, Parker MS, Vardi A, Armbrust EV, Weissenbach J, Katinka M and Bowler C | Genome Biology 11 (8), R85, 2010 | | | Acinetobacter baylyi ADP1 as a model for metabolic system biology | de Berardinis V, Durot M, Weissenbach J and Salanoubat M | Current Opinion in Microbiology 12 (5), 568-576, 2009 | | | Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress | Dittami SM, Scornet D, Petit JL, Segurens B, Da Silva C, Corre E, Dondrup M, Glatting KH, Konig R, Sterck L, Rouze P, Van de Peer Y, Cock JM, Boyen C and Tonon T | Genome Biology 10 (6), 51, 2009 | |
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